Reaction of beta-diketiminate copper(II) complexes and Na2S2

Reaction of beta-diketiminate copper(II) complexes and Na2S2 resulted in formation of (mu-eta2:eta2-disulfido)dicopper(II) complexes (adduct formation) or beta-diketiminate copper(I) complexes (reduction of copper(II)) depending on the substituents of the supporting ligands. In the case of sterically less demanding ligands, adduct formation occurred to provide the (mu-eta2:eta2-disulfido)dicopper(II) complexes, whereas reduction of copper(II) took place to give the corresponding copper(I) complexes with sterically more demanding beta-diketiminate ligands. Spectroscopic examinations of the reactions at low temperature using UV-vis and ESR as well as kinetic analysis have suggested that a 1 : 1 adduct LCuII-S-SNa with an end-on binding mode is initially formed as a common intermediate, from which different reaction pathways exist depending on the steric environment of the metal-coordination sphere provided by the ligands. Thus, with the sterically less demanding ligands, rearrangement of the disulfide adduct from end-on to side-on followed by self-dimerisation occurs to give the (mu-eta2:eta2-disulfido)dicopper(II) complexes, whereas such an intramolecular rearrangement of the disulfide co-ligand does not take place with the sterically more demanding ligands. In this case, homolytic cleavage of the CuII-S bond occurs to give the reduced copper(I) product. The steric effects of the supporting ligands have been discussed on the basis of detailed analysis of the crystal structures of the copper(II) starting materials.     

Photochromism of a radical diffusion-inhibited hexaarylbiimidazole derivative with intense coloration and fast decoloration performance

We report the synthesis and the photochromic behavior of a newly designed, photochromic, radical diffusion-inhibited hexaarylbiimidazole (HABI) derivative with markedly improved photochromic performance in coloration and decoloration rates as well as greater optical density in the colored state. The thermal bleaching rate (tau1/2 = 260 ms at 295 K) is the fastest among the reported ones for HABI derivatives.     

Activation parameters for the recombination reaction of intramolecular radical pairs generated from the radical diffusion-inhibited HABI derivative

Activation parameters were determined for the recombination of radical pairs arising from newly designed, photochromic, radical diffusion-restricted hexaarylbiimidazole (HABI) derivative. We have developed a new type of radical diffusion-inhibited HABI derivative, which contains two equivalent HABI units and yields a tetraradical with four equivalent 2,4,5-triphenylimidazolyl radical (TPIR) units by photoirradiation. This radical dimerization proceeds by a successive first-order reaction from the tetraradical to the parent molecule via a diradical. The rate constants of each reaction were determined from the decay profile of EPR signal intensities. The entropies of activation (DeltaS(double dagger)) for the first and the successive dimerization steps were estimated to be -178.5 and -205.5 J K(-1) mol(-1), respectively. Within the experimental temperature range, the radical dimerizations are entropy-controlled (-TDeltaS(double dagger) > DeltaH(double dagger)). The large negative DeltaS(double dagger) values imply a highly ordered transition state, indicating that the radical dimerizations occur when the TPIR units interact at a specific orientation. The present study demonstrates the availability of radical diffusion-inhibited HABI for the kinetic study of radical-radical reaction.     

A structural basis for the antibiotic resistance conferred by an A1408G mutation in 16S rRNA and for the antiprotozoal activity of aminoglycosides

Resistance explained: The crystal structures of the ribosomal decoding A?site with an A1408G antibiotic-resistance mutation were solved in the presence and absence of the aminoglycoside geneticin (see structure, geneticin carbon framework in yellow). These structures show how bacteria acquire high-level resistance against aminoglycosides by the mutation.     

Mechanistic study on the electrochemical reduction of 9,10-anthraquinone in the presence of hydrogen-bond and proton donating additives

The electrochemical reduction of 9,10-anthraquinone (AQ) was investigated in CH(3)CN in both the absence and presence of the hydrogen-bond and proton donating additives, CH(3)OH, CH(CF(3))(2)OH, phenol, 4-methoxyphenol, 4-cyanophenol, 2,4,6-trichlorophenol, and benzoic acid (BA). Three clearly different types of electrochemical behavior were observed with increasing concentrations of the additives, and were simulated to analyze the reaction mechanisms. Type I was observed for weakly interacting additives, such as CH(3)OH, characterized by positive shifts of the two well-separated reduction waves, corresponding to the formation of AQ(?-) and AQ(2-), with no loss of reversibility. The second wave shifted more strongly, and finally merged with the first. These behaviors are explained by the association of AQ(2-) with the additives via strong hydrogen-bonding. Type II is attributed to a reduction mechanism involving quantitative formation of strong hydrogen-bonded complexes of AQ(2-) with additives, such as CH(CF(3))(2)OH, phenol and 4-methoxyphenol, showing a reversible or quasireversible two-electron reduction wave with increasing concentrations of the additives. The behavior of Type III, observed in the presence of strongly interacting additives, such as 2,4,6-trichlorophenol and BA, is characterized by a voltammogram composed of the 2-electorn cathodic and the broad anodic waves without keeping reversibility, facilitated by proton transfer in the hydrogen-bonded complexes, AQ(?-)-BA and AQ(2-)-BA. The effects of hydrogen-bonding and protonation on the electrochemistry of AQ have been systematically demonstrated in terms of the potentials and reaction pathways of the various species, which appear in quinone-hydroquinone systems.     

Electrochemical behavior of [UO_2Cl_4]~(2-) in 1-ethyl-3-methylimidazolium based ionic liquids

In order to examine the chemical form of uranyl species in 1-ethyl-3-methylimidazolium(EMI) based ionic liquids,UV-visible absorption spectra of solutions prepared by dissolving [EMI] 2 [UO2Cl4] into a mixture of EMICl and EMIBF 4(50:50 mol%) were measured.As a result,it was confirmed that uranyl species in the mixture of EMICl and EMIBF 4 existed as [UO2Cl4]2-.Cyclic voltammograms(CVs) of [UO2Cl4]2-in the mixture were measured at 25 ℃ using a Pt working electrode,a Pt wire counter electrode,and an Ag/Ag + reference electrode(0.01 M AgNO 3,0.1 M tetrabutylammonium perchlorate in acetonitrile) in a glove box under an Ar atmosphere.Peaks corresponding to one redox couple were observed around-1.05 V(Epc) and-0.92 V(Epa) vs.ferrocene/ferrocenium ion(Fc/Fc +).The potential differences between two peaks(Ep) increased from 101 to 152 mV with an increase in the scan rate from 50 to 300 mV s-1,while the(Epc+Epa)/2 value was constant,-0.989 V vs.Fc/Fc + regardless of the scan rate.Furthermore,the diffusion coefficient of [UO2Cl4]2-and the standard rate constant were estimated to be 3.7 × 10-8 cm 2 s-1 and(2.7-2.8) × 10-4 cm s-1 at 25 oC.By using the diffusion coefficient and the standard rate constant,the simulation of CVs was performed based on the reaction,[UO2Cl4]2-+ e = [UO2Cl4]3-.The simulated CVs were found to be consistent with the experimental ones.From these results,it is concluded that [UO2Cl4]2-in the mixture of EMICl and EMIBF 4 is reduced to [UO2Cl4]3-quasi-reversibly at-0.989 V vs.Fc/Fc +.     

Ring A of nukacin ISK-1: a lipid II-binding motif for type-A(II) lantibiotic

Ring A of nukacin ISK-1, which is also present in different type-A(II) lantibiotics, resembles a lipid II-binding motif (TxS/TxD/EC, x denotes undefined residues) similar to that present in mersacidin (type-B lantibiotics), which suggests that nukacin ISK-1 binds to lipid II as a docking molecule. Results from our experiments on peptidoglycan precursor (UDP-MurNAc-pp) accumulation and peptide antagonism assays clearly indicated that nukacin ISK-1 inhibits cell-wall biosynthesis, accumulating lipid II precursor inside the cell, and the peptide activity can be repressed by lipid I and lipid II. Interaction analysis of nukacin ISK-1 and different ring A variants with lipid II revealed that nukacin ISK-1 and nukacin D13E (a more active variant) have a high affinity (K(D) = 0.17 and 0.19 μM, respectively) for lipid II, whereas nukacin D13A (a less active variant) showed a lower affinity, and nukacin C14S (a negative variant lacking the ring A structure) exhibited no interaction. Therefore, on the basis of the structural similarity and positional significance of the amino acids in this region, we concluded that nukacin ISK-1 binds lipid II via its ring A region and may lead to the inhibition of cell-wall biosynthesis.     

Energetics of dopant atoms in subsurface positions of diamond semiconductor

We present a set of ab initio energetics for a substitutional boron (B) impurity atom in subsurface positions, from the topmost to the fifth atomic layer, of both C(001)-2×1:H and C(111)-1×1:H. We compare the calculated surface-B binding energies with those obtained for P [T. Miyazaki, H. Kato, H. Okushi, S. Yamasaki, e-J. Surf. Sci. Nanotech. 4 (2006) 124]. The surface-P binding energies become larger as the position of P is closer to the two surfaces. They are up to 4 eV for C(001)-2×1:H and 2.6 eV for C(111)-1×1:H, respectively. For B, in contrast, the binding energies are within 0.5 eV for both surfaces. An implication of our finding in the context of a mechanism for P and B doping in diamond is discussed.     

Formation of metal-lustrous organic crystals from 2-aryl-1-(4-methoxyphenyl)-5-(5-tricyanoethenyl-2-thienyl)pyrroles

Various 2-aryl-1-(4-methoxyphenyl)-5-(5-tricyanoethenyl-2-thienyl)pyrroles (3) were synthesized. When the 2-aryl group of 3 is phenyl, 4-tolyl, and 4-methoxyphenyl, organic crystals with greenish yellow metallic luster are formed. In contrast, a 2-(4-fluorophenyl) derivative of 3 gives gold-like lustrous crystals. The relation of their crystal structures with the appearance of metallic color is mentioned.     

Greenish metal-lustrous organic crystals formed from 1-aryl-2-(2-thienyl)-5-(5-tricyanoethenyl-2-furyl)pyrroles

On the treatment of 1-aryl-2-(2-furyl)-5-(2-thienyl)pyrroles with tetracyanoethylene, 1-aryl-2-(2-thienyl)-5-(5-tricyanoethenyl-2-furyl)pyrroles were produced. These compounds formed crystals with greenish metallic luster. In their solid-state UV-vis-NIR diffuse reflection-absorption spectra, absorption band corresponding to metallic reflection spreads in the range of 550-900 nm. Furthermore, strong absorption appeared below 520-540 nm. This absorption results in the appearance of green color. Single-crystal X-ray crystallographic analysis revealed the crystal structure of 1-(4-methoxyphenyl)-2-(2-thienyl)-5-(5-tricyanoethenyl-2-furyl)pyrrole (2c). The distinct features of the crystal structure are as follows: (1) the thiophene-pyrrole-furan-tricyanoethenyl π-system is approximately flat; (2) the conformational relation between the pyrrole ring and the furan ring is anti, that is, these rings are pointing in opposite directions and the dihedral angle of N-C-C-O=180°; (3) as a result, the tricyanoethenyl group is far from the 4-methoxyphenyl group; (4) the molecules of 2c are arranged in a ribbon structure; (5) the ribbons are assembled side-by-side to form a terraced layer; (6) the layers stack so that the π-orbitals of 2c become close to each other.